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13. Considerations in Formalizing a Classification
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Raymond B. Phillips
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Chapters in this book
- Frontmatter I
- Contents V
- Preface IX
- Contributors XI
- Introduction XV
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Part I. Philosophical Concerns
- Introduction 3
- 1. Cladistic Theory: Hypotheses That Blur and Grow 5
- 2. The Relevance of Parsimony to Phylogenetic Inference 24
- 3. Monophyly: Its Meaning and Importance 39
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Part II. Character Evaluation
- Introduction 49
- 4. The Concept of Homology and Its Central Role in the Elucidation of Plant Systematic Relationships 51
- 5. Problems in the Determination of Evolutionary Directionality of Character-State Change for Phylogenetic Reconstruction 71
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Part III. Cladogram Construction
- Introduction 91
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Section A. Parsimony Methods
- 6. Applications of the Concepts of Groundplan-Divergence 95
- 7. Quantitative Parsimony 119
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Section B. Compatibility Methods
- 8. Phylogenetic Trees and Character-State Trees 135
- 9. Evaluating Characters by Character Compatibility Analysis 152
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Section C. Comparison of Methods
- 10. The Statistical Approach to Inferring Evolutionary Trees and What It Tells Us About Parsimony and Compatibility 169
- 11. Application of Compatibility and Parsimony Methods at the Infraspecific, Specific, and Generic Levels in Poaceae 192
- 12. Cladistic and Other Methods: Problems, Pitfalls, and Potentials 221
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Part IV. Applications
- Introduction 255
- 13. Considerations in Formalizing a Classification 257
- 14. Cladistics and Biogeography 273
- Appendix: An Introduction to Computer-Assisted Cladistic Analysis 295
- Participants in the Workshop on the Theory and Application of Cladistic Methodology 299
- Author Index 303
- Subject Index 307
Chapters in this book
- Frontmatter I
- Contents V
- Preface IX
- Contributors XI
- Introduction XV
-
Part I. Philosophical Concerns
- Introduction 3
- 1. Cladistic Theory: Hypotheses That Blur and Grow 5
- 2. The Relevance of Parsimony to Phylogenetic Inference 24
- 3. Monophyly: Its Meaning and Importance 39
-
Part II. Character Evaluation
- Introduction 49
- 4. The Concept of Homology and Its Central Role in the Elucidation of Plant Systematic Relationships 51
- 5. Problems in the Determination of Evolutionary Directionality of Character-State Change for Phylogenetic Reconstruction 71
-
Part III. Cladogram Construction
- Introduction 91
-
Section A. Parsimony Methods
- 6. Applications of the Concepts of Groundplan-Divergence 95
- 7. Quantitative Parsimony 119
-
Section B. Compatibility Methods
- 8. Phylogenetic Trees and Character-State Trees 135
- 9. Evaluating Characters by Character Compatibility Analysis 152
-
Section C. Comparison of Methods
- 10. The Statistical Approach to Inferring Evolutionary Trees and What It Tells Us About Parsimony and Compatibility 169
- 11. Application of Compatibility and Parsimony Methods at the Infraspecific, Specific, and Generic Levels in Poaceae 192
- 12. Cladistic and Other Methods: Problems, Pitfalls, and Potentials 221
-
Part IV. Applications
- Introduction 255
- 13. Considerations in Formalizing a Classification 257
- 14. Cladistics and Biogeography 273
- Appendix: An Introduction to Computer-Assisted Cladistic Analysis 295
- Participants in the Workshop on the Theory and Application of Cladistic Methodology 299
- Author Index 303
- Subject Index 307