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Two new defensive constituents from potato tubers (Solanum tuberosum)

  • Liangyan Liu , Jun Han and Yong Shen EMAIL logo
Published/Copyright: May 10, 2017
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Abstract

Two new defensive constituents, solatuberenol A (1) and 3-O-β-d-glucopyranosyl stigmasta-5(6),24(28)-diene (2), were isolated from the potato tubers (Solanum tuberosum) infected with late blight disease. Their structures were identified by extensive spectroscopic analysis, including HRMS, IR, UV, 1D/2D NMR, ECD and quantum chemical calculations. Compounds 1 and 2 showed moderate activity against Phytophthora infestans with mycelia-growth inhibition of 30.1% and 52.4%, respectively, at the concentration of 500 ppm.

1 Introduction

Potato (Solanum tuberosum L.) is one of the most important staple crops for direct and processed consumption in both developed and developing countries. It is the second most important crop in Europe and fourth on a global scale after wheat, rice and maize [1]. China with an annual yield of about 80 million tons is the largest potato producer in the world, accounting for 26.3% and 22.2% of the global total area and yield, respectively [2]. However, the potato production is seriously affected by the late blight disease (LBD), which is caused by pathogenic fungus (Phytophthora infestans) infection. The LBD can cause productivity losses of 20~30%, even up to 50~70%, and thus, the prevalence of LBD will lead to drastic consequences to the world food safety [3, 4]. Chemical fungicides (e.g. metalaxyl mancozeb and oxadixyl mancozeb) are widely used to prevent the pathogenic fungus; however, their application is limited because of the high toxicity and contamination to the environment. Defensive metabolites from natural sources are promising candidates for searching modern anti-LBD agents for the advantage of environmental friendliness [5, 6].

In order to clarify the defensive constituents of LBD-infected potatoes, phytochemical investigation on the tubers of S. tuberosum resulted in two new compounds, solatuberenol A (1) and 3-O-β-d-glucopyranosyl stigmasta-5(6),24(28)-diene (2). Herein, we reported their isolation, structural elucidation and antifungal activity against P. infestans.

2 Results and discussion

Compounds 1 and 2 were obtained from the tubers of S. tuberosum by repeated column chromatography (CC) on D101 macroporous adsorption resin, silica gel, sephadex LH-20. Their structures were identified to be solatuberenol A (1) and 3-O-β-d-glucopyranosyl stigmasta-5(6),24(28)-diene (2) (Fig. 1) by physical and spectroscopic data (HR-ESIMS, [α]D, 1D and 2D NMR and ECD).

Fig. 1: Structures of compounds 1 and 2.
Fig. 1:

Structures of compounds 1 and 2.

Compound 1 was obtained as white powder with a molecular formula of C13H20O3 (Ω=4), which was deduced from the negative HR-ESIMS at m/z=247.1289 ([M+Na]+, −1.6 mDa). The UV absorption peak at 237 nm indicated an α,β-unsaturated carbonyl group. In accordance with the molecular formula, all the 13 carbons were well resolved in the 13C NMR spectrum, including four methyls, one methylene, four methines and four quaternary carbons. In the 1H NMR spectrum, the singlet at δH=5.87 ppm suggested a tri-substituted double bond; two coupled protons at δH=5.74, (d, J=15.7 Hz) and 5.82 ppm (dd, J=15.7, 5.2 Hz) verified a E-form double bond. The 1H 1H COSY correlations of 7-H/8-H/9-H/10-H established the buten-2-ol moiety, which was further determined to be linked with C-6 by the HMBC correlations from 7-H and 8-H to C-6 (Fig. 2). The NMR data of 1 were similar to that of (R)-4-hydroxy-4-((S)-5-hydroxy-2-methylhexan-2-yl)-3-methylcyclopent-2-en-1-one [7], except for an additional double bond and the absence of two methylenes (C-6 and C-7). In the CD spectra, the negative Cotton effect at λ=320 nm (Δεmax=−1) for nπ* and the positive Cotton effect at λ=241 nm (Δεmax=+22) for ππ* indicated that the configuration at C-4 was S. The configuration at C-9 was assigned by quantum chemical calculations at the B3LYP/6-31G(d,p)//6-31G(d,p) levels. The calculated [α]D values for the two epimers were −54 (4S,9S) and +149° (4S,9R), respectively, and thus, the configuration at C-9 was determined as R by comparing to the experimental [α]D value (+193). On the basis of the above analyses, compound 1 was deduced to be (E,S)-4-hydroxy-4-((R)5-hydroxy-2-methylhex-3-en-2-yl)-3-methylcyclopent-2-en-1-one, and named as solatuberenol A (1).

Fig. 2: Key 2D correlations of compounds 1 and 2.
Fig. 2:

Key 2D correlations of compounds 1 and 2.

Compound 2 was isolated as white powder whose molecular formula was determined to be C35H58O6 by the prominent [M+H]+ ion peak at m/z=647.3341 (+0.1 mDa) in positive HR-ESIMS. In accordance with the molecular formula, all the 35 carbons were well recognized in the 13C NMR spectrum. Six carbons at δC=103.0, 75.8, 72.1, 79.1, 79.0 and 63.3 ppm were characteristic for the presence of glucosyl group, which was assigned as β-configuration by the anomeric proton at δH=5.10 ppm (J=7.7 Hz). In addition to the glucosyl moiety, the residual 29 carbons including six methyls (δC=12.4, 13.4, 19.5, 19.9, 21.66 and 21.7 ppm) suggested a steroid aglycone. Two pairs of tri-substituted double bonds at δC=141.3, 122.4, 146.3 and 117.5 ppm indicated a stigmasta-5(6),24(28)-diene skeleton, which was further verified by the HMBC correlations from 6-H to C-4, C-8 and C-10, and from 28-H to C-23 and C-25. The Δ24,28 double bond was designated to be Z-form from the correlations of 29-H/26, 27-H and 3-H/29-H in the ROESY spectrum [8]. In the HMBC spectrum, the correlations from 3-H to C-1′ and from 1′-H to C-3 assigned the glucosidation at C-3 position. Similarly, 3-H was proposed to occupy β-configuration from the chemical shift at δH=3.99 ppm (m) and the ROESY correlations between 3-H and 19-H3. Acidic hydrolysis of 2 yielded d-glucose, which was confirmed by the [α]D value of +51.3° (c=0.1, MeOH). From the above analyses, the structure of 2 was determined as 3-O-β-d-glucopyranosyl stigmasta-5(6),24(28)-diene.

Compounds 1 and 2 were assayed for their anti-LBD potency against the mycelia growth of P. infestans by fungal poisoned food technique. Compounds 1 and 2 showed moderate activity against P. infestans, with mycelia-growth inhibition of 30.1% and 52.4%, respectively, at the concentration of 500 ppm.

3 Experimental

3.1 General experimental procedures

Optical rotations were recorded on a Jasco model 1020 digital polarimeter (Horiba, Tokyo, Japan). Mass spectra were measured by a LCMS-IT-TOF mass spectrometer (Shimadzu, Kyoto, Japan). UV and IR (KBr) spectra were recorded on a Shimadzu UV2401PC spectrophotometer (Shimadzu, Kyoto, Japan) and a Bio-RadFTS-135 spectrometer (Hercules, California, USA). 1D and 2D NMR were recorded on DRX-500 or AVANCE III-600 spectrometer (Bruker, Bremerhaven, Germany). Silica gel (200−300 mesh) for column chromatography and TLC plates (GF254) were purchased from Qingdao Makall Chemical Company (Makall, Qingdao, China). Sephadex LH-20 for chromatography was obtained from Pharmacia Fine Chemical Co., Ltd. (Pharmacia, Uppsala, Sweden). D101 macroporous adsorption resin was purchased from Tianjin Bohong Resin Technology Co., Ltd. (Tianjin, China).

3.2 Plant material

The tubers of S. tuberosum were collected from the experimental farm of Yunnan agricultural university in August 2015. A voucher specimen (No. 201507002) was deposited in College of Agronomy and Biotechnology, Yunnan Agricultural University.

3.3 Extraction and isolation

The fresh tubers of S. tuberosum (5.0 kg) were cut to small pieces and extracted with 90% ethanol (15 L) at room temperature for two times, 48 h for each time. The combined extract was concentrated at reduced pressure and partitioned between ethyl acetate (EtOAc) and water. The EtOAc part (80 g) was loaded on D101 macroporous adsorption resin column and eluted with aqueous ethanol (10%, 50% and 90%) to give three fractions. The 50% ethanol part was further separated by silica gel column chromatography (Si CC) eluted with CHCl3-MeOH-H2O gradient (from 9:1:0.1 to 6:4:0.4) to generate four fractions A−D. Fr. B (1.2 g) was separated by Si CC (40 g) eluted with a gradient of EtOAc-MeOH-H2O (from 9:1:0 to 8:2:0.2) to give three subfractions. Fr. B3 (0.1 g) was subjected on sephadex LH-20 CC (MeOH) to provide Frs. B3-1 and B3-2. Fr. B3-2 was purified by Si CC with the elution of CHCl3-MeOH-H2O (9:1:0.1) to yield compounds 1 (4.5 mg) and 2 (6.5 mg).

3.4 Identification

Compound 1: white powder. – UV/Vis (MeOH): λmax (lg εmax)=237.2 (4.05), 198.6 nm (3.80). – CD (432 μM, MeOH): λmax (mdeg)=241 nm (+22), 320 nm (−1). – [α]D23=+193.3° (c=0.13, MeOH). – 1H NMR (400 MHz, CDCl3): δ=5.87 (s, 1 H, 2-H), 2.44 (d, J=22.4 Hz, 1 H, 5a-H), 2.26 (d, J=22.4 Hz, 1 H, 5b-H), 5.74 (d, J=15.7 Hz, 1 H, 7-H), 5.82 (dd, J=15.7, 5.2 Hz, 1 H, 8-H), 4.37 (m, 1 H, 9-H), 1.26 (d, J=6.4 Hz, 3 H, 10-H), 1.88 (s, 3 H, 11-H), 1.04 (s, 3 H, 12-H), 0.98 (s, 3 H, 13-H). – 13C NMR (100 MHz, CDCl3): δ=198.6 (1-C), 126.6 (2-C), 163.7 (3-C), 79.0 (4-C), 49.6 (5-C), 41.2 (6-C), 128.8 (7-C), 135.7 (8-C), 67.8 (9-C), 23.6 (10-C), 19.0 (11-C), 22.9 (12-C), 24.0 (13-C). – HRMS ((+)-ESI): m/z=247.1289 (calcd. 247.1310 for C13H20O3Na, [M+Na]+).

Compound 2: white powder. – [α]D23=+63.3° (c=0.13, MeOH). – 1H NMR (600 MHz, C6D5N): δ=1.62 (m, 1 H, 1a-H), 1.23 (m, 1 H, 1b-H), 2.15 (m, 1 H, 2a-H), 1.75 (m, 1 H, 2b-H), 3.99 (m, 1 H, 3-H), 2.76 (br.d, J=12.1 Hz, 1 H, 4a-H), 2.55 (t, J=12.1 Hz, 1 H, 4b-H), 5.36 (m, 1 H, 6-H), 1.90 (m, 1 H, 7a-H), 1.37 (m, 1 H, 7b-H), 1.54 (m, 1 H, 8-H), 0.90 (m, 1 H, 9-H), 1.44 (m, 1 H, 11a-H), 1.40 (m, 1 H, 11b-H), 1.97 (m, 1 H, 12a-H), 1.09 (m, 1 H, 12b-H), 0.92 (m, 1 H, 14-H), 1.55 (m, 1 H, 15-H), 1.86 (m, 1 H, 16a-H), 1.26 (m, 1 H, 16b-H), 1.11 (m, 1 H, 17-H), 0.65 (s, 3 H, 18-H), 0.93 (s, 3 H, 19-H), 1.41 (m, 1 H, 20-H), 1.00 (d, J=6.6 Hz, 3 H, 21-H), 1.73 (m, 1 H, 22a-H), 0.99 (m, 1 H, 22b-H), 2.13 (m, 1 H, 23-H), 2.88 (m, 1 H, 25-H), 1.04 (d, J=7.0 Hz, 3 H, 26-H), 1.04 (d, J=7.0 Hz, 3 H, 27-H), 5.26 (d, J=6.8 Hz, 1 H, 28-H), 1.65 (d, J=6.8 Hz, 3 H, 29-H), 5.10 (d, J=7.7 Hz, 1 H, 1′-H), 4.11 (t, J=7.7 Hz, 1 H, 2′-H), 4.34 (m, 1 H, 3′-H), 4.34 (m, 1 H, 4′-H), 4.03 (m, 1 H, 5′-H), 4.61 (dd, J=11.8, 2.2 Hz, 1 H, 6′a-H), 4.47 (dd, J=11.8, 5.4 Hz, 1 H, 6′b-H). – 13C NMR (150 MHz, C6D5N): δ=36.9 (1-C), 30.7 (2-C), 78.5 (3-C), 39.8 (4-C), 141.3 (5-C), 122.4 (6-C), 32.5 (7-C), 32.6 (8-C), 50.6 (9-C), 37.4 (10-C), 21.6 (11-C), 40.4 (12-C), 42.9 (13-C), 57.2 (14-C), 24.9 (15-C), 29.0 (16-C), 56.6 (17-C), 12.4 (18-C), 19.9 (19-C), 36.9 (20-C), 19.5 (21-C), 37.9 (22-C), 28.7 (23-C),146.3 (24-C), 29.4 (25-C), 21.7 (26-C), 21.6 (27-C), 117.5 (28-C), 13.4 (29-C), 103.0 (1′-C), 75.8 (2′-C), 72.1 (3′-C), 79.1 (4′-C), 79.0 (5′-C), 63.3 (6′-C). – HRMS ((+)-ESI): m/z=597.4161 (calcd. 597.4131 for C35H58O6Na, [M+Na]+).

3.5 Antifungal assay

Samples (0.5 mg) were dissolved in distilled water and mixed with 100 mL of rye medium in a conical flask to tive the final concentration of 500 ppm. The sample-free/containing medium was poured into the Petri dish and allowed to solidify. A disk of growing mycelia of P. infestans with a 6 mm of diameter was placed at the center of Petri dish and incubated at 17°C for 5 days. Three replications were maintained for each sample, along with one blank control. Radial growth of the mycelium in the treatment was compared with the blank control according to the following formula:

I=(CT)/(T6)×100%

In the formula, I=inhibition percentage of the growth of P. infestans; C=diameter (mm) of colony in control; T=diameter (mm) of colonies in treatment.

4 Supporting information

1D and 2D NMR, UV, CD, [α]D, HRMS, computational details and other supporting data associated with this article can be found in the online version (DOI: 10.1515/znb-2016-0234).

Acknowledgments

This work was supported by the National Natural Science Foundation of China (No. 21502167).

  1. Disclosure statement: No potential conflict of interest was reported by the authors.

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Supplemental Material:

The online version of this article offers supplementary material (DOI: https://doi.org/10.1515/znb-2016-0234).


Received: 2016-10-20
Accepted: 2017-1-18
Published Online: 2017-5-10
Published in Print: 2017-5-24

©2017 Walter de Gruyter GmbH, Berlin/Boston

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