A Biologist's Guide to Mathematical Modeling in Ecology and Evolution
-
Sarah P. Otto
and Troy Day
About this book
Thirty years ago, biologists could get by with a rudimentary grasp of mathematics and modeling. Not so today. In seeking to answer fundamental questions about how biological systems function and change over time, the modern biologist is as likely to rely on sophisticated mathematical and computer-based models as traditional fieldwork. In this book, Sarah Otto and Troy Day provide biology students with the tools necessary to both interpret models and to build their own.
The book starts at an elementary level of mathematical modeling, assuming that the reader has had high school mathematics and first-year calculus. Otto and Day then gradually build in depth and complexity, from classic models in ecology and evolution to more intricate class-structured and probabilistic models. The authors provide primers with instructive exercises to introduce readers to the more advanced subjects of linear algebra and probability theory. Through examples, they describe how models have been used to understand such topics as the spread of HIV, chaos, the age structure of a country, speciation, and extinction.
Ecologists and evolutionary biologists today need enough mathematical training to be able to assess the power and limits of biological models and to develop theories and models themselves. This innovative book will be an indispensable guide to the world of mathematical models for the next generation of biologists.
- A how-to guide for developing new mathematical models in biology
- Provides step-by-step recipes for constructing and analyzing models
- Interesting biological applications
- Explores classical models in ecology and evolution
- Questions at the end of every chapter
- Primers cover important mathematical topics
- Exercises with answers
- Appendixes summarize useful rules
- Labs and advanced material available
Author / Editor information
Reviews
"This book has the ambitious and worthy goal of teaching biologists enough about modeling and about mathematical methods to be both intelligent consumers of models and competent creators of their own models. Its concentration on the process of building rather than analyzing models is its strongest point."—Frederick R. Adler, author of Modeling the Dynamics of Life: Calculus and Probability for Life Scientists
"This book is an amazing teaching resource for developing a comprehensive understanding of the methods and importance of biological modeling. But more than that, this book should be read by every student of evolutionary biology and ecology so that they can come to a deeper appreciation of the fundamental ideas and models that underlie these fields."—Patrick C. Phillips, University of Oregon
"A wonderfully pedagogical introduction to mathematical modeling in population biology: an ideal first course for biologists."—Simon A. Levin, Princeton University
"[A] great textbook. . . . [M]asterful use of figures and illustrations and exercises . . . provide the reader with valuable practice in constructing models and implementing related mathematical techniques. I certainly recommend this text and can attest to its usefulness for budding researchers in the biological sciences."---Jason M. Graham, MAA Reviews
"This book provides a general introduction to mathematical modeling—in particular, to population modeling—in the biological sciences. This past year I taught a 400-level course in mathematical modeling of biological systems, and I had to do so without a textbook because no adequate text existed. Otto and Day's book would have met my needs beautifully. This book is an important addition to the field."—Carl Bergstrom, University of Washington
"Honorable Mention for the 2007 Best Professional/Scholarly Book in Biological Sciences, Association of American Publishers"
"I highly recommend this book for every university biology department because it provides both a unique, and often uplifting, introduction and a comprehensive reference of techniques for building and analysing mathematical models."---Volker Grimm, Basic and Applied Ecology
"At long last, Sally Otto and Troy Day have provided relief for biologists and epidemiologists in search of an easily read, practical, and thorough starting point from which to learn mathematical modeling. . . . We would recommend this book over shorter texts that are labeled as 'introductory'. . . . The depth and detail that Otto and Day have included in this text arc appealing rather than intimidating, and the structure of the text is empowering rather than didactic or formulaic."---Sanjay Basu and Alison P. Galvani, Siam Review
"There is an increasing use of mathematics throughout the biological sciences, yet the training of most biologists still woefully lacks crucial mathematical tools. Sally Otto and Troy Day are themselves two masters at the deft use of theoretical models to crystallize conceptual insights about ecological and evolutionary problems, and in this wonderful book they make accessible to a broad audience the essential mathematical tool kit biologists need, both to read the literature and to craft and analyze models themselves."—Robert D. Holt, University of Florida
"I am often asked by biologists to recommend a book on mathematical modeling, but I must tell them that there is no single good book that will guide them through the difficult first stages of learning to make models. Otto and Day's book fills the gap. The quality is high throughout, the scholarship is sound, the book is comprehensive. The authors are both first-rate scientists. I think this will be a classic."—Steven A. Frank, author of Immunology and Evolution of Infectious Disease
"A gentle but thorough introduction to the mathematical techniques employed in ecological and evolutionary theory. Readers who . . . finish this well-written book will be prepared to read and understand a sizeable fraction of the current literature."---Donald L. DeAngelis, Quarterly Review of Biology
"I cannot help but think that future textbook authors will want to have Otto and Day front and center on the work desk, for this is a valuable source of material. . . . This book stands out, and its contribution is quite apparent. In sum, this book is a valuable contribution to the literature, and one to which I expect to refer regularly in connection with my teaching and writing duties."---Steven G. Krantz, UMAP Journal
Topics
-
Download PDFPublicly Available
Frontmatter
i -
Download PDFPublicly Available
Contents
v -
Download PDFPublicly Available
Preface
ix -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 1: Mathematical Modeling in Biology
1 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 2: How to Construct a Model
17 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 3: Deriving Classic Models in Ecology and Evolutionary Biology
54 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 4: Numerical and Graphical Techniques–Developing a Feeling for Your Model
110 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 5: Equilibria and Stability Analyses–One-Variable Models
151 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 6: General Solutions and Transformations–One-Variable Models
191 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 7: Equilibria and Stability Analyses–Linear Models with Multiple Variables
254 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 8: Equilibria and Stability Analyses–Nonlinear Models with Multiple Variables
294 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 9: General Solutions and Tranformations–Models with Multiple Variables
347 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 10: Dynamics of Class-Structured Populations
386 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 11: Techniques for Analyzing Models with Periodic Behavior
423 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 12: Evolutionary Invasion Analysis
454 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 13: Probabilistic Models
567 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 14: Analyzing Discrete Stochastic Models
608 -
Download PDFRequires Authentication UnlicensedLicensed
Chapter 15: Analyzing Continuous Stochastic Models–Diffusion in Time and Space
649 -
Download PDFRequires Authentication UnlicensedLicensed
Epilogue: The Art of Mathematical Modeling in Biology
692 -
Download PDFRequires Authentication UnlicensedLicensed
Appendix 1: Commonly Used Mathematical Rules
695 -
Download PDFRequires Authentication UnlicensedLicensed
Appendix 2: Some Important Rules from Calculus
699 -
Download PDFRequires Authentication UnlicensedLicensed
Appendix 3: The Perron-Frobenius Theorem
709 -
Download PDFRequires Authentication UnlicensedLicensed
Appendix 4: Finding Maxima and Minima of Functions
713 -
Download PDFRequires Authentication UnlicensedLicensed
Appendix 5: Moment-Generating Functions
717 -
Download PDFRequires Authentication UnlicensedLicensed
Index of Definitions, Recipes, and Rules
725 -
Download PDFRequires Authentication UnlicensedLicensed
General Index
727