About the reliability of the Maximum Entropy Method in reconstructing electron density: the case of MgO
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Marcello Merli
Abstract
The reliability of the Maximum Entropy Method (MEM) to reconstruct finite temperature electron density (ED) is here discussed, investigating the case of periclase (MgO). A theoretical electron density has been generated by quantum mechanic calculations and folded with a function simulating atomic thermal motion, in order to produce a reference errorless ED [ρ(r)REF]. The Fourier coefficients of ρ(r)REF have been calculated, and used as “observed” diffraction intensities to reconstruct via MEM the original ED. The electron density attained by MEM [ρ(r)MEM] and ρ(r)REF have been compared with each other (pixel-by-pixel and critical points) to assess the ability of MEM to retrieve EDs, on the basis of a set of observed structure factors. We have carried out our study varying the number of observed structure factors [i.e. sin (θ)/λ cut-off], the nature of the prior-density [uniform density and procrystal-like model] and the way in which the prior-density is treated during MEM maximization [fixed or free to change]. We observe that (i) it is recommendable to use the prior-density as a start point only, and allow it to change during maximization; (ii) the closer is the prior-density to ρ(r)REF, the easier one attains by MEM a correct ED; (iii) if the prior-density is varied and a sufficient large number of observed structure factors used, then MEM tends to yield converging EDs, regardless of the prior-density chosen as a start point.
© Oldenbourg Wissenschaftsverlag
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- New isostructural ethylenediammonium diphosphates (NH3(CH2)2NH3)2[Me(HP2O7)2 · 2 H2O] [Me = Co, Ni]: X-ray crystal structure and vibrational spectroscopy
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Articles in the same Issue
- About the reliability of the Maximum Entropy Method in reconstructing electron density: the case of MgO
- Deformed model sets and distorted Penrose tilings
- Crystal structure of M(IO3)2 metal iodates, twinned bypseudo-merohedry, with MII: MgII, MnII, CoII, NiII and ZnII
- Structural variations in the solid solution series of sodalite-type |(EuxCa2–x)4(OH)8|[(Al2+xSi1–x)4O24]-SOD with 0 ≤ x ≤ 1, determined by X-ray powder diffraction and 27Al MAS NMR spectroscopy
- New isostructural ethylenediammonium diphosphates (NH3(CH2)2NH3)2[Me(HP2O7)2 · 2 H2O] [Me = Co, Ni]: X-ray crystal structure and vibrational spectroscopy
- Experimental charge density of an L-phenylalanine formic acid complex with a short hydrogen bond determined at 25 K