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Kinetic properties of cathepsin D and BACE 1 indicate the need to search for additional β-secretase candidate(s)

  • Israel Schechter and Etty Ziv
Published/Copyright: March 3, 2008
Biological Chemistry
From the journal Volume 389 Issue 3

Abstract

Many studies suggest that BACE 1 is the genuine β-secretase; however, this is not undisputed. The wild-type (WT) β-site of the amyloid precursor protein (APP) present in the worldwide population is cleaved very slowly (kcat/Km: approx. 50 m-1 s-1), while proteases acting on relevant substrates are much more efficient (kcat/Km: 104–106 m-1 s-1). Knock-out of BACE 1 in mouse markedly reduces Aβ formation. Nevertheless, studies in other systems show that knock-out experiments in rodents and corresponding genetic defects in human may reveal different phenotypes. Considering these issues, we searched for other β-secretase candidate(s), identified cathepsin D, and evaluated properties of cathepsin D related to BACE 1 that were not examined previously. The kinetic constants (kcat, Km, kcat/Km) for cleaving peptides with β-sites of the WT or the mutated Swedish families (SW) APP by human BACE 1 and cathepsin D were determined and found to be similar. Western blots reveal that in human brain cathepsin D is approximately 280-fold more abundant than BACE 1. Furthermore, pepstatin A strongly inhibits the cleavage of SW and WT peptides by both brain extracts and cathepsin D, but not by BACE 1. These findings indicate that β-secretase activity observed in brain extracts is mainly due to cathepsin D. Nevertheless, as both BACE 1 and cathepsin D show poor activity towards the WT β-site sequence, it is necessary to continue the search for additional β-secretase candidate(s).


Corresponding author

Received: 2007-7-26
Accepted: 2007-11-21
Published Online: 2008-03-03
Published in Print: 2008-03-01

©2008 by Walter de Gruyter Berlin New York

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